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Simple approach for ranking structure determining residues

dc.contributor.authorLuna Martínez, Oscar Daniel
dc.contributor.authorVidal Limón, Abraham Marcelino
dc.contributor.authorVillalba Velázquez, Miryam Ivette
dc.contributor.authorSánchez Alcalá, Rosalba
dc.contributor.authorGarduño Juárez, Ramón
dc.contributor.authorUversky, Vladimir
dc.contributor.authorBecerril Luján, Baltazar
dc.contributor.editorPeerJ, Inc
dc.date.accessioned2018-03-23T23:59:42Z
dc.date.available2018-03-23T23:59:42Z
dc.date.issued2016-06
dc.identifier.citationLuna-Martínez OD, Vidal-Limón A, Villalba-Velázquez MI, Sánchez-Alcalá R, Garduño-Juárez R, Uversky VN, Becerril B. (2016) Simple approach for ranking structure determining residues. PeerJ 4:e2136 https://doi.org/10.7717/peerj.2136
dc.identifier.urihttp://hdl.handle.net/11627/3713
dc.description.abstract"Mutating residues has been a common task in order to study structural properties of the protein of interest. Here, we propose and validate a simple method that allows the identification of structural determinants; i.e., residues essential for preservation of the stability of global structure, regardless of the protein topology. This method evaluates all of the residues in a 3D structure of a given globular protein by ranking them according to their connectivity and movement restrictions without topology constraints. Our results matched up with sequence-based predictors that look up for intrinsically disordered segments, suggesting that protein disorder can also be described with the proposed methodology."
dc.rightsAttribution-NonCommercial-NoDerivatives 4.0 Internacional
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/
dc.subjectMolecular dynamics
dc.subjectShannon dynamical entropy
dc.subjectIntrinsic disorder
dc.subjectThermodynamics
dc.subject.classificationBIOLOGÍA MOLECULAR
dc.titleSimple approach for ranking structure determining residues
dc.typearticle
dc.identifier.doihttps://doi.org/10.7717/peerj.2136
dc.rights.accessAcceso Abierto


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Attribution-NonCommercial-NoDerivatives 4.0 Internacional
Except where otherwise noted, this item's license is described as Attribution-NonCommercial-NoDerivatives 4.0 Internacional